Cluster: MGYG000004866_CGC10
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000004866
- CGC Family ID: CGCFAM_05590
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000004866_11 | MGYG000004866_11_41 | 48533 | 49750 | + | 9.B.10.1.1 |
| pfam | MGYG000004866_11 | MGYG000004866_11_42 | 49830 | 50807 | + | DUF1980_C |
| CAZyme | MGYG000004866_11 | MGYG000004866_11_43 | 51245 | 52090 | - | GT2 |
| peptidase | MGYG000004866_11 | MGYG000004866_11_44 | 52214 | 53704 | + | M32.UPW |
| TF | MGYG000004866_11 | MGYG000004866_11_45 | 53830 | 54180 | + | HTH_3 |
| TC | MGYG000004866_11 | MGYG000004866_11_46 | 54450 | 55349 | - | 3.A.1.1.27 |
| TC | MGYG000004866_11 | MGYG000004866_11_47 | 55346 | 56782 | - | 3.A.1.1.27 |
Gene ID: MGYG000004866_11_41
Type: TC
Location: 48533 - 49750 (+)
Type: TC
Location: 48533 - 49750 (+)
Gene ID: MGYG000004866_11_42
Type: pfam
Location: 49830 - 50807 (+)
Type: pfam
Location: 49830 - 50807 (+)
Gene ID: MGYG000004866_11_43
Type: CAZyme
Location: 51245 - 52090 (-)
Type: CAZyme
Location: 51245 - 52090 (-)
Gene ID: MGYG000004866_11_44
Type: peptidase
Location: 52214 - 53704 (+)
Type: peptidase
Location: 52214 - 53704 (+)
Gene ID: MGYG000004866_11_45
Type: TF
Location: 53830 - 54180 (+)
Type: TF
Location: 53830 - 54180 (+)
Gene ID: MGYG000004866_11_46
Type: TC
Location: 54450 - 55349 (-)
Type: TC
Location: 54450 - 55349 (-)
Gene ID: MGYG000004866_11_47
Type: TC
Location: 55346 - 56782 (-)
Type: TC
Location: 55346 - 56782 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Gemmiger
Species
Gemmiger variabilis_B
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.