Cluster: MGYG000004866_CGC17
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000004866
- CGC Family ID: CGCFAM_03447
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000004866_23 | MGYG000004866_23_31 | 28025 | 28864 | + | 3.A.1.1.47 |
| STP | MGYG000004866_23 | MGYG000004866_23_32 | 28972 | 30276 | + | SBP_bac_1 |
| TC | MGYG000004866_23 | MGYG000004866_23_33 | 30671 | 31228 | + | 3.A.1.1.37 |
| CAZyme | MGYG000004866_23 | MGYG000004866_23_34 | 31250 | 32617 | + | GH4 |
Gene ID: MGYG000004866_23_31
Type: TC
Location: 28025 - 28864 (+)
Type: TC
Location: 28025 - 28864 (+)
Gene ID: MGYG000004866_23_32
Type: STP
Location: 28972 - 30276 (+)
Type: STP
Location: 28972 - 30276 (+)
Gene ID: MGYG000004866_23_33
Type: TC
Location: 30671 - 31228 (+)
Type: TC
Location: 30671 - 31228 (+)
Gene ID: MGYG000004866_23_34
Type: CAZyme
Location: 31250 - 32617 (+)
Type: CAZyme
Location: 31250 - 32617 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Gemmiger
Species
Gemmiger variabilis_B
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.