Cluster: MGYG000004866_CGC8
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000004866
- CGC Family ID: CGCFAM_00113
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000004866_7 | MGYG000004866_7_66 | 77701 | 79443 | + | 3.A.1.117.2 |
| TC | MGYG000004866_7 | MGYG000004866_7_67 | 79427 | 81067 | + | 3.A.1.135.6 |
| TF | MGYG000004866_7 | MGYG000004866_7_68 | 81148 | 82032 | + | MerR |
| pfam | MGYG000004866_7 | MGYG000004866_7_69 | 82068 | 82718 | - | Hydrolase | HAD | Hydrolase_like | HAD_2 |
| CAZyme | MGYG000004866_7 | MGYG000004866_7_70 | 82728 | 83747 | - | GT2 |
Gene ID: MGYG000004866_7_66
Type: TC
Location: 77701 - 79443 (+)
Type: TC
Location: 77701 - 79443 (+)
Gene ID: MGYG000004866_7_67
Type: TC
Location: 79427 - 81067 (+)
Type: TC
Location: 79427 - 81067 (+)
Gene ID: MGYG000004866_7_68
Type: TF
Location: 81148 - 82032 (+)
Type: TF
Location: 81148 - 82032 (+)
Gene ID: MGYG000004866_7_69
Type: pfam
Location: 82068 - 82718 (-)
Type: pfam
Location: 82068 - 82718 (-)
Gene ID: MGYG000004866_7_70
Type: CAZyme
Location: 82728 - 83747 (-)
Type: CAZyme
Location: 82728 - 83747 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Gemmiger
Species
Gemmiger variabilis_B
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.