Genome Details
Selected Rep_genome_ID: MGYG000004275
Total Genomes Found: 6
Total Genomes Found: 6
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Ruminococcus_C
Species
Ruminococcus_C sp000437175
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| BF141_7_sub | 2,496,176 | 98.32% | 0.67% | NA | Africa | H3AfricaPhase2 |
| C40.CMAG_2 | 2,918,223 | 98.66% | 0.67% | China(Inner Mongolia) | Asia | IMGG |
| CGMR062484 | 2,242,473 | 95.97% | 0.67% | China | Asia | CGMR |
| MGYG000004275 | 2,279,760 | 96.76% | 0% | China | Asia | UHGG |
| Rep_3340 | 2,147,036 | 95.6376% | 1.34228% | NA | NA | WIS |
| SPMP38_bin.115 | 2,297,294 | 96.64% | 0.67% | Singapore | Asia | SPMP |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| MGYG000004275_CGC6 | CGCFAM_00281 | Yes | 10 | 4 | |
| MGYG000004275_CGC16 | CGCFAM_01097 | Yes | 4 | 2 | |
| MGYG000004275_CGC7 | CGCFAM_01574 | Yes | 6 | 1 | |
| MGYG000004275_CGC12 | CGCFAM_02333 | Yes | 5 | 1 | |
| MGYG000004275_CGC13 | CGCFAM_03007 | Yes | 6 | 1 | |
| MGYG000004275_CGC9 | CGCFAM_03008 | Yes | 5 | 2 | |
| MGYG000004275_CGC1 | CGCFAM_04263 | Yes | 5 | 2 | |
| MGYG000004275_CGC2 | CGCFAM_04265 | Yes | 4 | 1 | |
| MGYG000004275_CGC3 | CGCFAM_05364 | Yes | 10 | 2 | |
| MGYG000004275_CGC15 | CGCFAM_10641 | Yes | 6 | 1 |
Top CAZyme Families