Cluster: MGYG000004275_CGC2
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000004275
- CGC Family ID: CGCFAM_04265
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000004275_2 | MGYG000004275_2_2 | 990 | 2357 | - | 2.A.66.1.28 |
| pfam | MGYG000004275_2 | MGYG000004275_2_3 | 2338 | 3069 | - | MTS | Methyltransf_25 | Methyltransf_31 |
| pfam | MGYG000004275_2 | MGYG000004275_2_4 | 3083 | 3748 | - | Hydrolase | HAD | HAD_2 |
| CAZyme | MGYG000004275_2 | MGYG000004275_2_5 | 3887 | 5479 | - | GH13_20 |
Gene ID: MGYG000004275_2_2
Type: TC
Location: 990 - 2357 (-)
Type: TC
Location: 990 - 2357 (-)
Gene ID: MGYG000004275_2_3
Type: pfam
Location: 2338 - 3069 (-)
Type: pfam
Location: 2338 - 3069 (-)
Gene ID: MGYG000004275_2_4
Type: pfam
Location: 3083 - 3748 (-)
Type: pfam
Location: 3083 - 3748 (-)
Gene ID: MGYG000004275_2_5
Type: CAZyme
Location: 3887 - 5479 (-)
Type: CAZyme
Location: 3887 - 5479 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Ruminococcus_C
Species
Ruminococcus_C sp000437175
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| MGYG000004275_2_5 | vegan > omnivore | 1.19110 | 0.00364 |