Cluster: MGYG000004275_CGC7
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000004275
- CGC Family ID: CGCFAM_01574
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000004275_15 | MGYG000004275_15_17 | 16155 | 16949 | - | CE20 |
| pfam | MGYG000004275_15 | MGYG000004275_15_18 | 17114 | 17707 | + | Flavin_Reduct |
| peptidase | MGYG000004275_15 | MGYG000004275_15_19 | 17926 | 18636 | + | S14.UPW |
| TC | MGYG000004275_15 | MGYG000004275_15_20 | 18673 | 21222 | + | 3.A.12.1.1 |
| pfam | MGYG000004275_15 | MGYG000004275_15_21 | 21270 | 23165 | + | Radical_SAM_N | DUF3362 |
| TC | MGYG000004275_15 | MGYG000004275_15_22 | 23204 | 24067 | + | 3.A.11.1.1 |
Gene ID: MGYG000004275_15_17
Type: CAZyme
Location: 16155 - 16949 (-)
Type: CAZyme
Location: 16155 - 16949 (-)
Gene ID: MGYG000004275_15_18
Type: pfam
Location: 17114 - 17707 (+)
Type: pfam
Location: 17114 - 17707 (+)
Gene ID: MGYG000004275_15_19
Type: peptidase
Location: 17926 - 18636 (+)
Type: peptidase
Location: 17926 - 18636 (+)
Gene ID: MGYG000004275_15_20
Type: TC
Location: 18673 - 21222 (+)
Type: TC
Location: 18673 - 21222 (+)
Gene ID: MGYG000004275_15_21
Type: pfam
Location: 21270 - 23165 (+)
Type: pfam
Location: 21270 - 23165 (+)
Gene ID: MGYG000004275_15_22
Type: TC
Location: 23204 - 24067 (+)
Type: TC
Location: 23204 - 24067 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Ruminococcus_C
Species
Ruminococcus_C sp000437175
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.