Cluster: MGYG000004275_CGC9
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: MGYG000004275
- CGC Family ID: CGCFAM_03008
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000004275_18 | MGYG000004275_18_6 | 5777 | 6463 | + | 1.A.16.5.1 |
| TC | MGYG000004275_18 | MGYG000004275_18_7 | 6546 | 6923 | + | 1.A.43.1.5 |
| pfam | MGYG000004275_18 | MGYG000004275_18_8 | 7304 | 8029 | + | YgjP-like |
| CAZyme | MGYG000004275_18 | MGYG000004275_18_9 | 8314 | 11112 | + | CBM79 | CBM79 | GH9 |
| CAZyme | MGYG000004275_18 | MGYG000004275_18_10 | 11474 | 14581 | + | CBM4 | GH9 |
Gene ID: MGYG000004275_18_6
Type: TC
Location: 5777 - 6463 (+)
Type: TC
Location: 5777 - 6463 (+)
Gene ID: MGYG000004275_18_7
Type: TC
Location: 6546 - 6923 (+)
Type: TC
Location: 6546 - 6923 (+)
Gene ID: MGYG000004275_18_8
Type: pfam
Location: 7304 - 8029 (+)
Type: pfam
Location: 7304 - 8029 (+)
Gene ID: MGYG000004275_18_9
Type: CAZyme
Location: 8314 - 11112 (+)
Type: CAZyme
Location: 8314 - 11112 (+)
Gene ID: MGYG000004275_18_10
Type: CAZyme
Location: 11474 - 14581 (+)
Type: CAZyme
Location: 11474 - 14581 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Ruminococcus_C
Species
Ruminococcus_C sp000437175
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.