Cluster: MGYG000004275_CGC12
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000004275
- CGC Family ID: CGCFAM_02333
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000004275_26 | MGYG000004275_26_5 | 4895 | 5506 | - | 2.A.115.2.14 |
| CAZyme | MGYG000004275_26 | MGYG000004275_26_6 | 5659 | 7791 | - | CBM79 | CBM79 | GH5_4 |
| pfam | MGYG000004275_26 | MGYG000004275_26_7 | 8083 | 8664 | - | PTAC |
| peptidase | MGYG000004275_26 | MGYG000004275_26_8 | 8841 | 9965 | - | G05.UPW |
| TC | MGYG000004275_26 | MGYG000004275_26_9 | 10248 | 11132 | + | 2.A.115.1.1 |
Gene ID: MGYG000004275_26_5
Type: TC
Location: 4895 - 5506 (-)
Type: TC
Location: 4895 - 5506 (-)
Gene ID: MGYG000004275_26_6
Type: CAZyme
Location: 5659 - 7791 (-)
Type: CAZyme
Location: 5659 - 7791 (-)
Gene ID: MGYG000004275_26_7
Type: pfam
Location: 8083 - 8664 (-)
Type: pfam
Location: 8083 - 8664 (-)
Gene ID: MGYG000004275_26_8
Type: peptidase
Location: 8841 - 9965 (-)
Type: peptidase
Location: 8841 - 9965 (-)
Gene ID: MGYG000004275_26_9
Type: TC
Location: 10248 - 11132 (+)
Type: TC
Location: 10248 - 11132 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Ruminococcus_C
Species
Ruminococcus_C sp000437175
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| MGYG000004275_26_5 | vegan > omnivore | 1.01654 | 0.00364 |
| MGYG000004275_26_7 | vegan > omnivore | 1.27280 | 0.00364 |