Genome Details
Selected Rep_genome_ID: HRGMv2_4565
Total Genomes Found: 1
Total Genomes Found: 1
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Massiliimalia
Species
Massiliimalia massiliensis
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| HRGMv2_4565 | 2,225,414 | 97.98% | 0.894% | Malaysia | Asia | HRGM |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| HRGMv2_4565_CGC3 | CGCFAM_00004 | Yes | 8 | 4 | alpha-glucan |
| HRGMv2_4565_CGC24 | CGCFAM_00010 | Yes | 6 | 2 | alpha-glucan |
| HRGMv2_4565_CGC18 | CGCFAM_00124 | Yes | 4 | 1 | |
| HRGMv2_4565_CGC19 | CGCFAM_00124 | Yes | 5 | 2 | |
| HRGMv2_4565_CGC8 | CGCFAM_00161 | Yes | 8 | 1 | |
| HRGMv2_4565_CGC21 | CGCFAM_00166 | Yes | 4 | 1 | |
| HRGMv2_4565_CGC1 | CGCFAM_00527 | Yes | 4 | 1 | |
| HRGMv2_4565_CGC2 | CGCFAM_01088 | Yes | 3 | 1 | |
| HRGMv2_4565_CGC9 | CGCFAM_01998 | Yes | 5 | 1 | |
| HRGMv2_4565_CGC7 | CGCFAM_02692 | Yes | 4 | 1 | |
| HRGMv2_4565_CGC20 | CGCFAM_03172 | Yes | 3 | 1 | |
| HRGMv2_4565_CGC13 | CGCFAM_03232 | Yes | 8 | 4 | |
| HRGMv2_4565_CGC26 | CGCFAM_04898 | Yes | 3 | 1 |
Top CAZyme Families