Cluster: HRGMv2_4565_CGC19
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_4565
- CGC Family ID: CGCFAM_00124
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4565_64 | HRGMv2_4565_64_6 | 5537 | 6796 | + | GT4 |
| STP | HRGMv2_4565_64 | HRGMv2_4565_64_7 | 6995 | 8380 | + | Pyr_redox_2 |
| CAZyme | HRGMv2_4565_64 | HRGMv2_4565_64_8 | 8539 | 10794 | + | GH3 |
| pfam | HRGMv2_4565_64 | HRGMv2_4565_64_9 | 10863 | 11615 | - | RrnaAD | Methyltransf_11 | Methyltransf_12 | Methyltransf_23 | Methyltransf_25 | Methyltransf_31 |
| TC | HRGMv2_4565_64 | HRGMv2_4565_64_10 | 11651 | 12448 | - | 1.A.23.4.2 |
Gene ID: HRGMv2_4565_64_6
Type: CAZyme
Location: 5537 - 6796 (+)
Type: CAZyme
Location: 5537 - 6796 (+)
Gene ID: HRGMv2_4565_64_7
Type: STP
Location: 6995 - 8380 (+)
Type: STP
Location: 6995 - 8380 (+)
Gene ID: HRGMv2_4565_64_8
Type: CAZyme
Location: 8539 - 10794 (+)
Type: CAZyme
Location: 8539 - 10794 (+)
Gene ID: HRGMv2_4565_64_9
Type: pfam
Location: 10863 - 11615 (-)
Type: pfam
Location: 10863 - 11615 (-)
Gene ID: HRGMv2_4565_64_10
Type: TC
Location: 11651 - 12448 (-)
Type: TC
Location: 11651 - 12448 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Massiliimalia
Species
Massiliimalia massiliensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.