Cluster: HRGMv2_4565_CGC1
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4565
- CGC Family ID: CGCFAM_00527
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4565_2 | HRGMv2_4565_2_59 | 62483 | 64423 | + | GT2 |
| TF | HRGMv2_4565_2 | HRGMv2_4565_2_60 | 64581 | 64799 | - | HTH_3 |
| NULL(UNKNOWN) | HRGMv2_4565_2 | HRGMv2_4565_2_61 | 64964 | 65296 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_4565_2 | HRGMv2_4565_2_62 | 65334 | 65804 | - | 3.A.1.3.25 |
Gene ID: HRGMv2_4565_2_59
Type: CAZyme
Location: 62483 - 64423 (+)
Type: CAZyme
Location: 62483 - 64423 (+)
Gene ID: HRGMv2_4565_2_60
Type: TF
Location: 64581 - 64799 (-)
Type: TF
Location: 64581 - 64799 (-)
Gene ID: HRGMv2_4565_2_61
Type:
Location: 64964 - 65296 (+)
Type:
Location: 64964 - 65296 (+)
Gene ID: HRGMv2_4565_2_62
Type: TC
Location: 65334 - 65804 (-)
Type: TC
Location: 65334 - 65804 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Massiliimalia
Species
Massiliimalia massiliensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.