Cluster: HRGMv2_4565_CGC18
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4565
- CGC Family ID: CGCFAM_00124
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4565_61 | HRGMv2_4565_61_9 | 8276 | 9739 | + | GH29 |
| TC | HRGMv2_4565_61 | HRGMv2_4565_61_10 | 9786 | 10658 | - | 2.A.7.2.1 |
| pfam | HRGMv2_4565_61 | HRGMv2_4565_61_11 | 10806 | 11576 | + | PCMT | Ubie_methyltran | MetW | Methyltransf_11 | Methyltransf_12 | Methyltransf_23 | Methyltransf_25 | Methyltransf_31 |
| TC | HRGMv2_4565_61 | HRGMv2_4565_61_12 | 11661 | 13043 | - | 2.A.66.1.32 |
Gene ID: HRGMv2_4565_61_9
Type: CAZyme
Location: 8276 - 9739 (+)
Type: CAZyme
Location: 8276 - 9739 (+)
Gene ID: HRGMv2_4565_61_10
Type: TC
Location: 9786 - 10658 (-)
Type: TC
Location: 9786 - 10658 (-)
Gene ID: HRGMv2_4565_61_11
Type: pfam
Location: 10806 - 11576 (+)
Type: pfam
Location: 10806 - 11576 (+)
Gene ID: HRGMv2_4565_61_12
Type: TC
Location: 11661 - 13043 (-)
Type: TC
Location: 11661 - 13043 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Massiliimalia
Species
Massiliimalia massiliensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.