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Cluster: HRGMv2_4565_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4565_8 HRGMv2_4565_8_16 13963 14790 - 3.A.1.132.3
pfam HRGMv2_4565_8 HRGMv2_4565_8_17 14814 15176 - DUF134
CAZyme HRGMv2_4565_8 HRGMv2_4565_8_18 15435 17615 + GH13_9
pfam HRGMv2_4565_8 HRGMv2_4565_8_19 17649 18839 + NTP_transferase | Hexapep_GlmU
pfam HRGMv2_4565_8 HRGMv2_4565_8_20 18878 19996 + NTP_transferase | Hexapep_GlmU
CAZyme HRGMv2_4565_8 HRGMv2_4565_8_21 20073 21563 + GT5
CAZyme HRGMv2_4565_8 HRGMv2_4565_8_22 21915 24329 + GT35
CAZyme HRGMv2_4565_8 HRGMv2_4565_8_23 24446 26302 + GH13_39
Gene ID: HRGMv2_4565_8_16
Type: TC
Location: 13963 - 14790 (-)
Gene ID: HRGMv2_4565_8_17
Type: pfam
Location: 14814 - 15176 (-)
Gene ID: HRGMv2_4565_8_18
Type: CAZyme
Location: 15435 - 17615 (+)
Gene ID: HRGMv2_4565_8_19
Type: pfam
Location: 17649 - 18839 (+)
Gene ID: HRGMv2_4565_8_20
Type: pfam
Location: 18878 - 19996 (+)
Gene ID: HRGMv2_4565_8_21
Type: CAZyme
Location: 20073 - 21563 (+)
Gene ID: HRGMv2_4565_8_22
Type: CAZyme
Location: 21915 - 24329 (+)
Gene ID: HRGMv2_4565_8_23
Type: CAZyme
Location: 24446 - 26302 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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