Cluster: HRGMv2_4565_CGC21
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4565
- CGC Family ID: CGCFAM_00166
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4565_81 | HRGMv2_4565_81_2 | 1972 | 2895 | + | 3.A.1.1.11 |
| TC | HRGMv2_4565_81 | HRGMv2_4565_81_3 | 2907 | 3746 | + | 3.A.1.1.18 |
| NULL(UNKNOWN) | HRGMv2_4565_81 | HRGMv2_4565_81_4 | 3773 | 5191 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_4565_81 | HRGMv2_4565_81_5 | 5228 | 6535 | + | GH151 |
Gene ID: HRGMv2_4565_81_2
Type: TC
Location: 1972 - 2895 (+)
Type: TC
Location: 1972 - 2895 (+)
Gene ID: HRGMv2_4565_81_3
Type: TC
Location: 2907 - 3746 (+)
Type: TC
Location: 2907 - 3746 (+)
Gene ID: HRGMv2_4565_81_4
Type:
Location: 3773 - 5191 (+)
Type:
Location: 3773 - 5191 (+)
Gene ID: HRGMv2_4565_81_5
Type: CAZyme
Location: 5228 - 6535 (+)
Type: CAZyme
Location: 5228 - 6535 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Massiliimalia
Species
Massiliimalia massiliensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.