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Cluster: HRGMv2_4565_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4565_14 HRGMv2_4565_14_25 23125 24243 + 3.A.1.1.24
pfam HRGMv2_4565_14 HRGMv2_4565_14_26 24581 25666 + HTH_30 | GGDEF_2
TC HRGMv2_4565_14 HRGMv2_4565_14_27 25876 26586 + 3.A.1.140.1
pfam HRGMv2_4565_14 HRGMv2_4565_14_28 26576 27808 + FtsX | FtsX_ECD
STP HRGMv2_4565_14 HRGMv2_4565_14_29 27839 29200 + Peptidase_M23
TC HRGMv2_4565_14 HRGMv2_4565_14_30 29282 30478 + 9.B.174.1.2
pfam HRGMv2_4565_14 HRGMv2_4565_14_31 30547 32292 - Dak1 | Dak2
CAZyme HRGMv2_4565_14 HRGMv2_4565_14_32 32407 33372 - GH146
Gene ID: HRGMv2_4565_14_25
Type: TC
Location: 23125 - 24243 (+)
Gene ID: HRGMv2_4565_14_26
Type: pfam
Location: 24581 - 25666 (+)
Gene ID: HRGMv2_4565_14_27
Type: TC
Location: 25876 - 26586 (+)
Gene ID: HRGMv2_4565_14_28
Type: pfam
Location: 26576 - 27808 (+)
Gene ID: HRGMv2_4565_14_29
Type: STP
Location: 27839 - 29200 (+)
Gene ID: HRGMv2_4565_14_30
Type: TC
Location: 29282 - 30478 (+)
Gene ID: HRGMv2_4565_14_31
Type: pfam
Location: 30547 - 32292 (-)
Gene ID: HRGMv2_4565_14_32
Type: CAZyme
Location: 32407 - 33372 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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