Genome Details
Selected Rep_genome_ID: HRGMv2_4412
Total Genomes Found: 1
Total Genomes Found: 1
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Faecivivens
Species
Faecivivens sp944387995
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| HRGMv2_4412 | 2,388,943 | 94.57% | 2.818% | UK | Europe | HRGM |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| HRGMv2_4412_CGC3 | CGCFAM_00004 | Yes | 12 | 4 | alpha-glucan |
| HRGMv2_4412_CGC23 | CGCFAM_00021 | Yes | 4 | 1 | |
| HRGMv2_4412_CGC24 | CGCFAM_00030 | Yes | 5 | 1 | |
| HRGMv2_4412_CGC13 | CGCFAM_00338 | Yes | 3 | 1 | |
| HRGMv2_4412_CGC10 | CGCFAM_01080 | Yes | 7 | 2 | fructan |
| HRGMv2_4412_CGC22 | CGCFAM_01104 | Yes | 10 | 2 | |
| HRGMv2_4412_CGC30 | CGCFAM_02223 | Yes | 4 | 1 | |
| HRGMv2_4412_CGC12 | CGCFAM_02548 | Yes | 5 | 2 | |
| HRGMv2_4412_CGC29 | CGCFAM_04929 | Yes | 3 | 1 | |
| HRGMv2_4412_CGC20 | CGCFAM_06763 | Yes | 3 | 1 | |
| HRGMv2_4412_CGC18 | CGCFAM_10604 | Yes | 10 | 3 |
Top CAZyme Families