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Cluster: HRGMv2_4412_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_4412_11 HRGMv2_4412_11_26 25416 27077 + GH13_31
TF HRGMv2_4412_11 HRGMv2_4412_11_27 27231 28256 - LacI
TC HRGMv2_4412_11 HRGMv2_4412_11_28 28519 29838 + 3.A.1.1.20
TC HRGMv2_4412_11 HRGMv2_4412_11_29 29838 30746 + 3.A.1.1.20
TC HRGMv2_4412_11 HRGMv2_4412_11_30 30718 31569 + 3.A.1.1.20
TC HRGMv2_4412_11 HRGMv2_4412_11_31 31573 32667 + 3.A.1.1.27
CAZyme HRGMv2_4412_11 HRGMv2_4412_11_32 32660 33970 + GH32
Gene ID: HRGMv2_4412_11_26
Type: CAZyme
Location: 25416 - 27077 (+)
Gene ID: HRGMv2_4412_11_27
Type: TF
Location: 27231 - 28256 (-)
Gene ID: HRGMv2_4412_11_28
Type: TC
Location: 28519 - 29838 (+)
Gene ID: HRGMv2_4412_11_29
Type: TC
Location: 29838 - 30746 (+)
Gene ID: HRGMv2_4412_11_30
Type: TC
Location: 30718 - 31569 (+)
Gene ID: HRGMv2_4412_11_31
Type: TC
Location: 31573 - 32667 (+)
Gene ID: HRGMv2_4412_11_32
Type: CAZyme
Location: 32660 - 33970 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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