Cluster: HRGMv2_4412_CGC30
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4412
- CGC Family ID: CGCFAM_02223
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4412_129 | HRGMv2_4412_129_1 | 158 | 2401 | - | GH3 |
| NULL(UNKNOWN) | HRGMv2_4412_129 | HRGMv2_4412_129_2 | 2428 | 2538 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | HRGMv2_4412_129 | HRGMv2_4412_129_3 | 2554 | 2811 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_4412_129 | HRGMv2_4412_129_4 | 3562 | 4059 | - | 3.A.1.5.20 |
Gene ID: HRGMv2_4412_129_1
Type: CAZyme
Location: 158 - 2401 (-)
Type: CAZyme
Location: 158 - 2401 (-)
Gene ID: HRGMv2_4412_129_2
Type:
Location: 2428 - 2538 (-)
Type:
Location: 2428 - 2538 (-)
Gene ID: HRGMv2_4412_129_3
Type:
Location: 2554 - 2811 (-)
Type:
Location: 2554 - 2811 (-)
Gene ID: HRGMv2_4412_129_4
Type: TC
Location: 3562 - 4059 (-)
Type: TC
Location: 3562 - 4059 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Faecivivens
Species
Faecivivens sp944387995
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.