Cluster: HRGMv2_4412_CGC24
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4412
- CGC Family ID: CGCFAM_00030
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4412_79 | HRGMv2_4412_79_3 | 1936 | 3243 | + | 2.A.49.9.1 |
| TC | HRGMv2_4412_79 | HRGMv2_4412_79_4 | 3303 | 5129 | - | 3.A.1.106.3 |
| TC | HRGMv2_4412_79 | HRGMv2_4412_79_5 | 5126 | 6961 | - | 3.A.1.135.5 |
| CAZyme | HRGMv2_4412_79 | HRGMv2_4412_79_6 | 7343 | 9643 | - | CBM67 | GH78 |
| TC | HRGMv2_4412_79 | HRGMv2_4412_79_7 | 10039 | 10317 | - | 3.A.1.1.29 |
Gene ID: HRGMv2_4412_79_3
Type: TC
Location: 1936 - 3243 (+)
Type: TC
Location: 1936 - 3243 (+)
Gene ID: HRGMv2_4412_79_4
Type: TC
Location: 3303 - 5129 (-)
Type: TC
Location: 3303 - 5129 (-)
Gene ID: HRGMv2_4412_79_5
Type: TC
Location: 5126 - 6961 (-)
Type: TC
Location: 5126 - 6961 (-)
Gene ID: HRGMv2_4412_79_6
Type: CAZyme
Location: 7343 - 9643 (-)
Type: CAZyme
Location: 7343 - 9643 (-)
Gene ID: HRGMv2_4412_79_7
Type: TC
Location: 10039 - 10317 (-)
Type: TC
Location: 10039 - 10317 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Faecivivens
Species
Faecivivens sp944387995
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.