Cluster: HRGMv2_4412_CGC12
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_4412
- CGC Family ID: CGCFAM_02548
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4412_13 | HRGMv2_4412_13_4 | 3133 | 4839 | + | GH3 |
| TF | HRGMv2_4412_13 | HRGMv2_4412_13_5 | 4933 | 6177 | + | HTH_AraC | HTH_AraC |
| CAZyme | HRGMv2_4412_13 | HRGMv2_4412_13_6 | 6331 | 8115 | + | GH2 |
| NULL(UNKNOWN) | HRGMv2_4412_13 | HRGMv2_4412_13_7 | 8281 | 8415 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_4412_13 | HRGMv2_4412_13_8 | 8433 | 9551 | - | 3.B.1.1.5 |
Gene ID: HRGMv2_4412_13_4
Type: CAZyme
Location: 3133 - 4839 (+)
Type: CAZyme
Location: 3133 - 4839 (+)
Gene ID: HRGMv2_4412_13_5
Type: TF
Location: 4933 - 6177 (+)
Type: TF
Location: 4933 - 6177 (+)
Gene ID: HRGMv2_4412_13_6
Type: CAZyme
Location: 6331 - 8115 (+)
Type: CAZyme
Location: 6331 - 8115 (+)
Gene ID: HRGMv2_4412_13_7
Type:
Location: 8281 - 8415 (-)
Type:
Location: 8281 - 8415 (-)
Gene ID: HRGMv2_4412_13_8
Type: TC
Location: 8433 - 9551 (-)
Type: TC
Location: 8433 - 9551 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Faecivivens
Species
Faecivivens sp944387995
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.