Genome Details
Selected Rep_genome_ID: HRGMv2_4064
Total Genomes Found: 2
Total Genomes Found: 2
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Pumilibacteraceae
Genus
Protoclostridium
Species
Protoclostridium sp949292715
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| CGMR087216 | 1,990,437 | 90.92% | 0.04% | China | Asia | CGMR |
| HRGMv2_4064 | 1,996,199 | 91.58% | 0.041% | UK | Europe | HRGM |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| HRGMv2_4064_CGC8 | CGCFAM_00003 | Yes | 6 | 2 | |
| HRGMv2_4064_CGC12 | CGCFAM_00761 | Yes | 3 | 2 | |
| HRGMv2_4064_CGC3 | CGCFAM_00813 | Yes | 3 | 1 | |
| HRGMv2_4064_CGC16 | CGCFAM_01058 | Yes | 3 | 1 | |
| HRGMv2_4064_CGC13 | CGCFAM_01947 | Yes | 4 | 2 | |
| HRGMv2_4064_CGC1 | CGCFAM_02548 | Yes | 5 | 2 | |
| HRGMv2_4064_CGC10 | CGCFAM_03283 | Yes | 3 | 1 | |
| HRGMv2_4064_CGC5 | CGCFAM_03283 | Yes | 5 | 2 |
Top CAZyme Families