Cluster: HRGMv2_4064_CGC3
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4064
- CGC Family ID: CGCFAM_00813
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4064_2 | HRGMv2_4064_2_28 | 35301 | 36989 | + | 2.A.21.2.2 |
| NULL(UNKNOWN) | HRGMv2_4064_2 | HRGMv2_4064_2_29 | 37047 | 37250 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_4064_2 | HRGMv2_4064_2_30 | 37452 | 44654 | + | GH94 | GT84 |
Gene ID: HRGMv2_4064_2_28
Type: TC
Location: 35301 - 36989 (+)
Type: TC
Location: 35301 - 36989 (+)
Gene ID: HRGMv2_4064_2_29
Type:
Location: 37047 - 37250 (+)
Type:
Location: 37047 - 37250 (+)
Gene ID: HRGMv2_4064_2_30
Type: CAZyme
Location: 37452 - 44654 (+)
Type: CAZyme
Location: 37452 - 44654 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Pumilibacteraceae
Genus
Protoclostridium
Species
Protoclostridium sp949292715
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.