Cluster: HRGMv2_4064_CGC12
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_4064
- CGC Family ID: CGCFAM_00761
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4064_16 | HRGMv2_4064_16_30 | 29934 | 30887 | + | 3.A.1.1.22 |
| CAZyme | HRGMv2_4064_16 | HRGMv2_4064_16_31 | 31106 | 33061 | + | CBM48 | GH13_9 |
| CAZyme | HRGMv2_4064_16 | HRGMv2_4064_16_32 | 33070 | 34602 | + | GT5 |
Gene ID: HRGMv2_4064_16_30
Type: TC
Location: 29934 - 30887 (+)
Type: TC
Location: 29934 - 30887 (+)
Gene ID: HRGMv2_4064_16_31
Type: CAZyme
Location: 31106 - 33061 (+)
Type: CAZyme
Location: 31106 - 33061 (+)
Gene ID: HRGMv2_4064_16_32
Type: CAZyme
Location: 33070 - 34602 (+)
Type: CAZyme
Location: 33070 - 34602 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Pumilibacteraceae
Genus
Protoclostridium
Species
Protoclostridium sp949292715
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.