Cluster: HRGMv2_4064_CGC16
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4064
- CGC Family ID: CGCFAM_01058
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4064_43 | HRGMv2_4064_43_3 | 2801 | 5950 | + | GH3 |
| NULL(UNKNOWN) | HRGMv2_4064_43 | HRGMv2_4064_43_4 | 5947 | 7620 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_4064_43 | HRGMv2_4064_43_5 | 7825 | 9747 | - | 3.A.1.121.4 |
Gene ID: HRGMv2_4064_43_3
Type: CAZyme
Location: 2801 - 5950 (+)
Type: CAZyme
Location: 2801 - 5950 (+)
Gene ID: HRGMv2_4064_43_4
Type:
Location: 5947 - 7620 (+)
Type:
Location: 5947 - 7620 (+)
Gene ID: HRGMv2_4064_43_5
Type: TC
Location: 7825 - 9747 (-)
Type: TC
Location: 7825 - 9747 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Pumilibacteraceae
Genus
Protoclostridium
Species
Protoclostridium sp949292715
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.