Cluster: HRGMv2_4064_CGC13
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_4064
- CGC Family ID: CGCFAM_01947
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4064_17 | HRGMv2_4064_17_2 | 1265 | 5338 | + | GH3 |
| CAZyme | HRGMv2_4064_17 | HRGMv2_4064_17_3 | 5369 | 8401 | + | GH3 |
| NULL(UNKNOWN) | HRGMv2_4064_17 | HRGMv2_4064_17_4 | 8452 | 9135 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_4064_17 | HRGMv2_4064_17_5 | 9175 | 12810 | + | 1.C.39.4.6 |
Gene ID: HRGMv2_4064_17_2
Type: CAZyme
Location: 1265 - 5338 (+)
Type: CAZyme
Location: 1265 - 5338 (+)
Gene ID: HRGMv2_4064_17_3
Type: CAZyme
Location: 5369 - 8401 (+)
Type: CAZyme
Location: 5369 - 8401 (+)
Gene ID: HRGMv2_4064_17_4
Type:
Location: 8452 - 9135 (+)
Type:
Location: 8452 - 9135 (+)
Gene ID: HRGMv2_4064_17_5
Type: TC
Location: 9175 - 12810 (+)
Type: TC
Location: 9175 - 12810 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Pumilibacteraceae
Genus
Protoclostridium
Species
Protoclostridium sp949292715
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.