PROTEIN: HRGMv2_4064_17_4
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Protein File & Metadata
Source:
HRGMv2_4064_17_4.pdb
Genome ID:
Protein ID:
HRGMv2_4064_17_4
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Protein Sequence
MKKFLVVIAC LLVTIVAAAM FAACGESSAD PVDPNDKTTL RMEAEYIELV DEDGNELQGG 60 GWSNEASGYD LVYGEGASED AKQNWSNGYF LCETHREGLV LEFVFESNMD TTARIYWAVG 120 NQITGSITLT PDVFSVELND EEINYSATQV TGYEISEMEF TRKQITSKAV NIKKGTNVIK 180 LTVKSNSFKT GATGGPMIDY VEVKAEDKSA VLSWQPHTEN TEDHGDF 227
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-Q870B3-F1-model_v4 | CBM35 , GH26 | 36 | 208 | 18 | 144 | 0.5441 |
0.8539 |
| WAH41326.1 | CBM35 | 36 | 207 | 61 | 188 | 0.5364 |
0.8547 |
| AF-A0A1D7VUB7-F1-model_v4 | CBM35 | 34 | 206 | 158 | 299 | 0.446 |
0.7896 |
| AF-A0A6I6SGH8-F1-model_v4 | CBM35 | 34 | 207 | 160 | 302 | 0.4449 |
0.7858 |
| AF-A0A286HXE5-F1-model_v4 | CBM35 | 34 | 208 | 160 | 303 | 0.444 |
0.7823 |
| AF-J1S7U3-F1-model_v4 | CBM35 | 34 | 207 | 160 | 302 | 0.4439 |
0.7875 |
| AF-A0A1V0TVF3-F1-model_v4 | CBM35 | 34 | 206 | 159 | 300 | 0.4436 |
0.7866 |
| AF-A0A3S9YEV0-F1-model_v4 | CBM35 | 34 | 206 | 162 | 303 | 0.443 |
0.7879 |
| AF-A0A0K2AU83-F1-model_v4 | CBM35 | 35 | 207 | 174 | 316 | 0.4384 |
0.7895 |
| AF-A0A7T1WT25-F1-model_v4 | CBM35 | 36 | 207 | 177 | 317 | 0.4255 |
0.7743 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A7Z2T6V3 | CBM6 | 35 | 208 | 25 | 168 | 0.5826 |
0.7918 |
| WAH41326.1 | CBM35 | 36 | 207 | 61 | 188 | 0.5364 |
0.8547 |
| QDO74395.1 | CBM35 | 36 | 206 | 67 | 194 | 0.5156 |
0.8333 |
| L0EAN7 | CBM35 , GH26 | 36 | 208 | 35 | 161 | 0.4635 |
0.8461 |
| J1S7U3 | CBM35 | 34 | 207 | 160 | 302 | 0.4439 |
0.7875 |
| A0A2Z4V0G1 | CBM35 | 35 | 207 | 207 | 350 | 0.4156 |
0.7706 |
| UIX30979.1 | CBM35 | 20 | 204 | 10 | 356 | 0.4092 |
0.6117 |
| BCD95966.1 | CBM35 , CE12 | 36 | 217 | 80 | 218 | 0.3946 |
0.8411 |
| A0A089IN24 | CBM35 | 4 | 207 | 41 | 594 | 0.384 |
0.6231 |
| UEM07894.1 | CBM35 , GH105 | 35 | 211 | 43 | 478 | 0.376 |
0.6697 |
Structural Homologs - PDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs - SwissProt
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.