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Genome Details

Selected Rep_genome_ID: HRGMv2_4004
Total Genomes Found: 2
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Genomes Table
Genome ID Genome Length Completeness Contamination Country Continent Source
AG195_25 3,149,793 97.38% 0.57% NA Africa H3AfricaPhase2
HRGMv2_4004 3,322,998 99.24% 0.754% Congo Africa HRGM
Analysis Charts
CGCs
Gene Cluster ID Family Name In Labeled Family Gene Count CAZyme Count Substrate
HRGMv2_4004_CGC31 CGCFAM_00044 Yes 10 6 beta-mannan/xylan/beta-glucan
HRGMv2_4004_CGC8 CGCFAM_00061 Yes 3 1
HRGMv2_4004_CGC34 CGCFAM_00069 Yes 4 1
HRGMv2_4004_CGC12 CGCFAM_00143 Yes 9 1
HRGMv2_4004_CGC11 CGCFAM_00227 Yes 5 1
HRGMv2_4004_CGC13 CGCFAM_00319 Yes 3 1
HRGMv2_4004_CGC2 CGCFAM_00400 Yes 8 3
HRGMv2_4004_CGC16 CGCFAM_00608 Yes 5 4
HRGMv2_4004_CGC44 CGCFAM_00646 Yes 5 2 arabinogalactan
HRGMv2_4004_CGC28 CGCFAM_00669 Yes 6 1
HRGMv2_4004_CGC18 CGCFAM_00867 Yes 8 4
HRGMv2_4004_CGC23 CGCFAM_01011 Yes 4 1
HRGMv2_4004_CGC17 CGCFAM_01094 Yes 5 4
HRGMv2_4004_CGC15 CGCFAM_01456 Yes 5 1
HRGMv2_4004_CGC24 CGCFAM_01916 Yes 9 5
HRGMv2_4004_CGC10 CGCFAM_02274 Yes 3 1
HRGMv2_4004_CGC45 CGCFAM_03581 Yes 3 1
HRGMv2_4004_CGC22 CGCFAM_05465 Yes 12 3
HRGMv2_4004_CGC19 CGCFAM_05989 Yes 11 3
HRGMv2_4004_CGC5 CGCFAM_06251 Yes 5 2
HRGMv2_4004_CGC20 CGCFAM_06262 Yes 4 1
HRGMv2_4004_CGC46 CGCFAM_06263 Yes 5 2
HRGMv2_4004_CGC29 CGCFAM_06977 Yes 3 1
HRGMv2_4004_CGC42 CGCFAM_07541 Yes 5 3
HRGMv2_4004_CGC1 CGCFAM_10518 Yes 4 1
Top CAZyme Families