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Cluster: HRGMv2_4004_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_4004_1 HRGMv2_4004_1_93 111652 112614 + GT8
TC HRGMv2_4004_1 HRGMv2_4004_1_94 112655 113995 + 2.A.66.1.27
pfam HRGMv2_4004_1 HRGMv2_4004_1_95 114181 114795 + DUF4254
CAZyme HRGMv2_4004_1 HRGMv2_4004_1_96 114779 115852 + GT9
STP HRGMv2_4004_1 HRGMv2_4004_1_97 115852 116880 + AAA
pfam HRGMv2_4004_1 HRGMv2_4004_1_98 116909 118396 + Polysacc_synt
TC HRGMv2_4004_1 HRGMv2_4004_1_99 118393 119787 + 9.B.145.1.2
CAZyme HRGMv2_4004_1 HRGMv2_4004_1_100 119784 120878 + GT4
Gene ID: HRGMv2_4004_1_93
Type: CAZyme
Location: 111652 - 112614 (+)
Gene ID: HRGMv2_4004_1_94
Type: TC
Location: 112655 - 113995 (+)
Gene ID: HRGMv2_4004_1_95
Type: pfam
Location: 114181 - 114795 (+)
Gene ID: HRGMv2_4004_1_96
Type: CAZyme
Location: 114779 - 115852 (+)
Gene ID: HRGMv2_4004_1_97
Type: STP
Location: 115852 - 116880 (+)
Gene ID: HRGMv2_4004_1_98
Type: pfam
Location: 116909 - 118396 (+)
Gene ID: HRGMv2_4004_1_99
Type: TC
Location: 118393 - 119787 (+)
Gene ID: HRGMv2_4004_1_100
Type: CAZyme
Location: 119784 - 120878 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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