Genome Details
Selected Rep_genome_ID: HRGMv2_3984
Total Genomes Found: 1
Total Genomes Found: 1
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes_A
Species
Alistipes_A sp019422485
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| HRGMv2_3984 | 2,426,554 | 97.8% | 0.48% | South Korea | Asia | HRGM |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| HRGMv2_3984_CGC24 | CGCFAM_00077 | Yes | 8 | 3 | |
| HRGMv2_3984_CGC25 | CGCFAM_01217 | Yes | 3 | 1 | |
| HRGMv2_3984_CGC20 | CGCFAM_01677 | Yes | 3 | 1 | |
| HRGMv2_3984_CGC3 | CGCFAM_02153 | Yes | 6 | 2 | |
| HRGMv2_3984_CGC8 | CGCFAM_02706 | Yes | 3 | 1 | |
| HRGMv2_3984_CGC2 | CGCFAM_05940 | Yes | 4 | 2 | |
| HRGMv2_3984_CGC19 | CGCFAM_09717 | Yes | 5 | 2 |
Top CAZyme Families