Cluster: HRGMv2_3984_CGC3
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_3984
- CGC Family ID: CGCFAM_02153
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3984_2 | HRGMv2_3984_2_90 | 90521 | 93625 | + | GH2 |
| CAZyme | HRGMv2_3984_2 | HRGMv2_3984_2_91 | 93738 | 96488 | + | CBM67 | GH78 |
| pfam | HRGMv2_3984_2 | HRGMv2_3984_2_92 | 96756 | 96998 | + | TatA_B_E |
| TC | HRGMv2_3984_2 | HRGMv2_3984_2_93 | 97023 | 97871 | + | 2.A.64.3.2 |
| TC | HRGMv2_3984_2 | HRGMv2_3984_2_94 | 98150 | 100726 | - | 3.A.3.2.39 |
| TC | HRGMv2_3984_2 | HRGMv2_3984_2_95 | 100778 | 102217 | - | 2.A.103.1.2 |
Gene ID: HRGMv2_3984_2_90
Type: CAZyme
Location: 90521 - 93625 (+)
Type: CAZyme
Location: 90521 - 93625 (+)
Gene ID: HRGMv2_3984_2_91
Type: CAZyme
Location: 93738 - 96488 (+)
Type: CAZyme
Location: 93738 - 96488 (+)
Gene ID: HRGMv2_3984_2_92
Type: pfam
Location: 96756 - 96998 (+)
Type: pfam
Location: 96756 - 96998 (+)
Gene ID: HRGMv2_3984_2_93
Type: TC
Location: 97023 - 97871 (+)
Type: TC
Location: 97023 - 97871 (+)
Gene ID: HRGMv2_3984_2_94
Type: TC
Location: 98150 - 100726 (-)
Type: TC
Location: 98150 - 100726 (-)
Gene ID: HRGMv2_3984_2_95
Type: TC
Location: 100778 - 102217 (-)
Type: TC
Location: 100778 - 102217 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes_A
Species
Alistipes_A sp019422485
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.