Cluster: HRGMv2_3984_CGC8
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3984
- CGC Family ID: CGCFAM_02706
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3984_6 | HRGMv2_3984_6_39 | 48839 | 49519 | - | GH25 |
| TC | HRGMv2_3984_6 | HRGMv2_3984_6_40 | 49631 | 51943 | + | 1.B.14.10.1 |
| TC | HRGMv2_3984_6 | HRGMv2_3984_6_41 | 52178 | 53482 | - | 2.A.13.1.3 |
Gene ID: HRGMv2_3984_6_39
Type: CAZyme
Location: 48839 - 49519 (-)
Type: CAZyme
Location: 48839 - 49519 (-)
Gene ID: HRGMv2_3984_6_40
Type: TC
Location: 49631 - 51943 (+)
Type: TC
Location: 49631 - 51943 (+)
Gene ID: HRGMv2_3984_6_41
Type: TC
Location: 52178 - 53482 (-)
Type: TC
Location: 52178 - 53482 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes_A
Species
Alistipes_A sp019422485
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.