Cluster: HRGMv2_3984_CGC25
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3984
- CGC Family ID: CGCFAM_01217
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3984_39 | HRGMv2_3984_39_9 | 10006 | 11151 | - | GT4 |
| pfam | HRGMv2_3984_39 | HRGMv2_3984_39_10 | 11380 | 12888 | - | GH3 | GH3_M | GH3_C |
| TC | HRGMv2_3984_39 | HRGMv2_3984_39_11 | 12955 | 14295 | - | 2.A.38.1.1 |
Gene ID: HRGMv2_3984_39_9
Type: CAZyme
Location: 10006 - 11151 (-)
Type: CAZyme
Location: 10006 - 11151 (-)
Gene ID: HRGMv2_3984_39_10
Type: pfam
Location: 11380 - 12888 (-)
Type: pfam
Location: 11380 - 12888 (-)
Gene ID: HRGMv2_3984_39_11
Type: TC
Location: 12955 - 14295 (-)
Type: TC
Location: 12955 - 14295 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes_A
Species
Alistipes_A sp019422485
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.