Cluster: HRGMv2_3984_CGC19
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_3984
- CGC Family ID: CGCFAM_09717
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3984_27 | HRGMv2_3984_27_5 | 4286 | 6649 | - | 1.B.14.3.6 |
| pfam | HRGMv2_3984_27 | HRGMv2_3984_27_6 | 7161 | 7673 | - | DUF1573 | HYDIN_VesB_CFA65-like_Ig |
| CAZyme | HRGMv2_3984_27 | HRGMv2_3984_27_7 | 7660 | 9762 | - | GH163 |
| pfam | HRGMv2_3984_27 | HRGMv2_3984_27_8 | 9809 | 12787 | - | TPR_16 | TPR_16 |
| CAZyme | HRGMv2_3984_27 | HRGMv2_3984_27_9 | 12790 | 14283 | - | GT2 |
Gene ID: HRGMv2_3984_27_5
Type: TC
Location: 4286 - 6649 (-)
Type: TC
Location: 4286 - 6649 (-)
Gene ID: HRGMv2_3984_27_6
Type: pfam
Location: 7161 - 7673 (-)
Type: pfam
Location: 7161 - 7673 (-)
Gene ID: HRGMv2_3984_27_7
Type: CAZyme
Location: 7660 - 9762 (-)
Type: CAZyme
Location: 7660 - 9762 (-)
Gene ID: HRGMv2_3984_27_8
Type: pfam
Location: 9809 - 12787 (-)
Type: pfam
Location: 9809 - 12787 (-)
Gene ID: HRGMv2_3984_27_9
Type: CAZyme
Location: 12790 - 14283 (-)
Type: CAZyme
Location: 12790 - 14283 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes_A
Species
Alistipes_A sp019422485
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.