Cluster: HRGMv2_3984_CGC2
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_3984
- CGC Family ID: CGCFAM_05940
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3984_1 | HRGMv2_3984_1_76 | 90354 | 92042 | + | GT83 |
| pfam | HRGMv2_3984_1 | HRGMv2_3984_1_77 | 92268 | 92642 | + | GtrA_DPMS_TM |
| CAZyme | HRGMv2_3984_1 | HRGMv2_3984_1_78 | 92746 | 94776 | - | GH13_8 |
| TC | HRGMv2_3984_1 | HRGMv2_3984_1_79 | 94987 | 96669 | + | 2.A.17.4.2 |
Gene ID: HRGMv2_3984_1_76
Type: CAZyme
Location: 90354 - 92042 (+)
Type: CAZyme
Location: 90354 - 92042 (+)
Gene ID: HRGMv2_3984_1_77
Type: pfam
Location: 92268 - 92642 (+)
Type: pfam
Location: 92268 - 92642 (+)
Gene ID: HRGMv2_3984_1_78
Type: CAZyme
Location: 92746 - 94776 (-)
Type: CAZyme
Location: 92746 - 94776 (-)
Gene ID: HRGMv2_3984_1_79
Type: TC
Location: 94987 - 96669 (+)
Type: TC
Location: 94987 - 96669 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes_A
Species
Alistipes_A sp019422485
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.