Genome Details
Selected Rep_genome_ID: HRGMv2_3872
Total Genomes Found: 1
Total Genomes Found: 1
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Muribaculaceae
Genus
Lepagella
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| HRGMv2_3872 | 2,433,731 | 94.21% | 0.377% | UK | Europe | HRGM |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| HRGMv2_3872_CGC24 | CGCFAM_00017 | Yes | 12 | 4 | fructan |
| HRGMv2_3872_CGC5 | CGCFAM_00068 | Yes | 6 | 2 | |
| HRGMv2_3872_CGC20 | CGCFAM_00109 | Yes | 6 | 2 | host glycan |
| HRGMv2_3872_CGC9 | CGCFAM_00118 | Yes | 7 | 3 | |
| HRGMv2_3872_CGC2 | CGCFAM_00137 | Yes | 4 | 2 | |
| HRGMv2_3872_CGC34 | CGCFAM_00145 | Yes | 5 | 3 | |
| HRGMv2_3872_CGC7 | CGCFAM_00321 | Yes | 15 | 7 | |
| HRGMv2_3872_CGC18 | CGCFAM_00714 | Yes | 5 | 1 | |
| HRGMv2_3872_CGC13 | CGCFAM_00719 | Yes | 9 | 3 | beta-glucan |
| HRGMv2_3872_CGC11 | CGCFAM_00923 | Yes | 3 | 1 | |
| HRGMv2_3872_CGC29 | CGCFAM_00998 | Yes | 7 | 2 | |
| HRGMv2_3872_CGC31 | CGCFAM_01396 | Yes | 11 | 3 | |
| HRGMv2_3872_CGC21 | CGCFAM_01830 | Yes | 9 | 3 | |
| HRGMv2_3872_CGC10 | CGCFAM_02234 | Yes | 8 | 2 | |
| HRGMv2_3872_CGC26 | CGCFAM_03997 | Yes | 7 | 2 | |
| HRGMv2_3872_CGC12 | CGCFAM_05405 | Yes | 4 | 1 | |
| HRGMv2_3872_CGC3 | CGCFAM_06017 | Yes | 6 | 4 | |
| HRGMv2_3872_CGC19 | CGCFAM_06249 | Yes | 4 | 1 | |
| HRGMv2_3872_CGC28 | CGCFAM_08853 | Yes | 3 | 1 | |
| HRGMv2_3872_CGC17 | CGCFAM_09631 | Yes | 4 | 1 |
Top CAZyme Families