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Cluster: HRGMv2_3872_CGC31

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3872_72 HRGMv2_3872_72_1 3 599 + 3.A.2.1.3
TC HRGMv2_3872_72 HRGMv2_3872_72_2 630 1508 + 3.A.2.1.1
STP HRGMv2_3872_72 HRGMv2_3872_72_3 1531 2049 + Fer4 | Fer4
pfam HRGMv2_3872_72 HRGMv2_3872_72_4 2074 2601 + Oxidored_q3
TC HRGMv2_3872_72 HRGMv2_3872_72_5 2607 2918 + 3.D.1.2.1
TC HRGMv2_3872_72 HRGMv2_3872_72_6 2921 4906 + 3.D.1.2.1
TC HRGMv2_3872_72 HRGMv2_3872_72_7 4933 6450 + 3.D.1.5.1
TC HRGMv2_3872_72 HRGMv2_3872_72_8 6481 7938 + 3.D.9.1.1
CAZyme HRGMv2_3872_72 HRGMv2_3872_72_9 8344 10296 + GH133
CAZyme HRGMv2_3872_72 HRGMv2_3872_72_10 10320 11582 + GT4
CAZyme HRGMv2_3872_72 HRGMv2_3872_72_11 11620 13065 + GH57
Gene ID: HRGMv2_3872_72_1
Type: TC
Location: 3 - 599 (+)
Gene ID: HRGMv2_3872_72_2
Type: TC
Location: 630 - 1508 (+)
Gene ID: HRGMv2_3872_72_3
Type: STP
Location: 1531 - 2049 (+)
Gene ID: HRGMv2_3872_72_4
Type: pfam
Location: 2074 - 2601 (+)
Gene ID: HRGMv2_3872_72_5
Type: TC
Location: 2607 - 2918 (+)
Gene ID: HRGMv2_3872_72_6
Type: TC
Location: 2921 - 4906 (+)
Gene ID: HRGMv2_3872_72_7
Type: TC
Location: 4933 - 6450 (+)
Gene ID: HRGMv2_3872_72_8
Type: TC
Location: 6481 - 7938 (+)
Gene ID: HRGMv2_3872_72_9
Type: CAZyme
Location: 8344 - 10296 (+)
Gene ID: HRGMv2_3872_72_10
Type: CAZyme
Location: 10320 - 11582 (+)
Gene ID: HRGMv2_3872_72_11
Type: CAZyme
Location: 11620 - 13065 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Muribaculaceae
→
Genus
Lepagella
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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