dbCAN Logo

Cluster: HRGMv2_3872_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_3872_17 HRGMv2_3872_17_12 17584 20070 + GT51
TC HRGMv2_3872_17 HRGMv2_3872_17_13 20125 22485 + 3.B.1.1.6
pfam HRGMv2_3872_17 HRGMv2_3872_17_14 22711 22965 + Ribosomal_L31
pfam HRGMv2_3872_17 HRGMv2_3872_17_15 23094 23657 + Pep_deformylase
TC HRGMv2_3872_17 HRGMv2_3872_17_16 23673 25358 + 3.A.1.120.6
TC HRGMv2_3872_17 HRGMv2_3872_17_17 25505 27196 + 2.A.81.1.2
pfam HRGMv2_3872_17 HRGMv2_3872_17_18 27525 28085 + Ferritin | Rubrerythrin | RUBY_RBDX
CAZyme HRGMv2_3872_17 HRGMv2_3872_17_19 28251 30374 + GH97
Gene ID: HRGMv2_3872_17_12
Type: CAZyme
Location: 17584 - 20070 (+)
Gene ID: HRGMv2_3872_17_13
Type: TC
Location: 20125 - 22485 (+)
Gene ID: HRGMv2_3872_17_14
Type: pfam
Location: 22711 - 22965 (+)
Gene ID: HRGMv2_3872_17_15
Type: pfam
Location: 23094 - 23657 (+)
Gene ID: HRGMv2_3872_17_16
Type: TC
Location: 23673 - 25358 (+)
Gene ID: HRGMv2_3872_17_17
Type: TC
Location: 25505 - 27196 (+)
Gene ID: HRGMv2_3872_17_18
Type: pfam
Location: 27525 - 28085 (+)
Gene ID: HRGMv2_3872_17_19
Type: CAZyme
Location: 28251 - 30374 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Muribaculaceae
→
Genus
Lepagella
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List