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Cluster: HRGMv2_3872_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_3872_25 HRGMv2_3872_25_9 6779 7924 + GT19
NULL(UNKNOWN) HRGMv2_3872_25 HRGMv2_3872_25_10 7936 8322 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_3872_25 HRGMv2_3872_25_11 8463 10787 - GH3
NULL(UNKNOWN) HRGMv2_3872_25 HRGMv2_3872_25_12 10803 12047 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_3872_25 HRGMv2_3872_25_13 12072 13745 - 8.A.46.2.2
TC HRGMv2_3872_25 HRGMv2_3872_25_14 13758 16958 - 1.B.14.6.2
CAZyme HRGMv2_3872_25 HRGMv2_3872_25_15 16968 17756 - GH16_3
TF HRGMv2_3872_25 HRGMv2_3872_25_16 18010 21984 - HTH_AraC
TC HRGMv2_3872_25 HRGMv2_3872_25_17 22231 23955 - 2.A.53.3.9
Gene ID: HRGMv2_3872_25_9
Type: CAZyme
Location: 6779 - 7924 (+)
Gene ID: HRGMv2_3872_25_10
Type:
Location: 7936 - 8322 (+)
Gene ID: HRGMv2_3872_25_11
Type: CAZyme
Location: 8463 - 10787 (-)
Gene ID: HRGMv2_3872_25_12
Type:
Location: 10803 - 12047 (-)
Gene ID: HRGMv2_3872_25_13
Type: TC
Location: 12072 - 13745 (-)
Gene ID: HRGMv2_3872_25_14
Type: TC
Location: 13758 - 16958 (-)
Gene ID: HRGMv2_3872_25_15
Type: CAZyme
Location: 16968 - 17756 (-)
Gene ID: HRGMv2_3872_25_16
Type: TF
Location: 18010 - 21984 (-)
Gene ID: HRGMv2_3872_25_17
Type: TC
Location: 22231 - 23955 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Muribaculaceae
→
Genus
Lepagella
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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