PROTEIN: HRGMv2_3872_25_12
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Protein File & Metadata
Source:
HRGMv2_3872_25_12.pdb
Genome ID:
Protein ID:
HRGMv2_3872_25_12
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Protein Sequence
MKSIYKSLLL LPVLVFVLAG CSKDEPFSVA TETDEPHILD PTFPDKVNGQ LPVVANISRD 60 ANFKMSLTVT PSQSTEVDWF IDGEKVATGT TIDLPLLAGS YQMKVTATTT AGKSTYREGI 120 VNVSTLDGDP WATTVNFERI IAPGSNAYLY GDNLQKVKSM RIGNTEIPSV TYNTEDGYLS 180 YSVPSSLENG TMRVILIDAE GMEYGANTVT VSSSPLVTSG ADRMTAGTRC KLTGINLDQI 240 SKLTLGSQDL DIVERSASEI TVECPALEDG VYQLTGVSGQ GTVQFFIDGA VKDEATVTVT 300 SEQTVWTGHH YVSWDLPDED PNKTFNLIPS DVFAAMKPGS IMTIHYSVEP SAEYHQLRTV 360 TGWWNDLPGT SVIEFQENGS KEVVMSADVL AAIAEQGGFL CVGHGYYVDL VTVR 414
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs - CAZyme3D-Whole
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs - CAZyme-ID50
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 6e9b-assembly3.cif.gz_C | 31 | 414 | 1 | 386 | 0.6533 |
0.6948 |
| 6e9b-assembly1.cif.gz_A | 30 | 414 | 1 | 381 | 0.6412 |
0.6834 |
| 6e57-assembly2.cif.gz_B | 30 | 413 | 1 | 383 | 0.6383 |
0.6801 |
| 6e57-assembly1.cif.gz_A | 27 | 414 | 7 | 398 | 0.6382 |
0.6837 |
| 6e9b-assembly2.cif.gz_B | 30 | 414 | 1 | 377 | 0.624 |
0.6689 |
| 6e9b-assembly4.cif.gz_D | 34 | 414 | 1 | 368 | 0.5976 |
0.6509 |
Structural Homologs - SwissProt
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.