Genome Details
Selected Rep_genome_ID: HRGMv2_3868
Total Genomes Found: 1
Total Genomes Found: 1
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Muribaculaceae
Genus
Limisoma
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| HRGMv2_3868 | 2,739,801 | 96.79% | 0% | UK | Europe | HRGM |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| HRGMv2_3868_CGC9 | CGCFAM_00001 | Yes | 4 | 2 | pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan |
| HRGMv2_3868_CGC1 | CGCFAM_00003 | Yes | 10 | 3 | |
| HRGMv2_3868_CGC11 | CGCFAM_00068 | Yes | 7 | 3 | |
| HRGMv2_3868_CGC26 | CGCFAM_00080 | Yes | 4 | 1 | |
| HRGMv2_3868_CGC21 | CGCFAM_00145 | Yes | 7 | 4 | |
| HRGMv2_3868_CGC28 | CGCFAM_00440 | Yes | 9 | 3 | |
| HRGMv2_3868_CGC22 | CGCFAM_00758 | Yes | 10 | 3 | |
| HRGMv2_3868_CGC12 | CGCFAM_00811 | Yes | 3 | 1 | |
| HRGMv2_3868_CGC3 | CGCFAM_01497 | Yes | 6 | 2 | |
| HRGMv2_3868_CGC17 | CGCFAM_03541 | Yes | 4 | 1 | |
| HRGMv2_3868_CGC25 | CGCFAM_03829 | Yes | 3 | 1 | |
| HRGMv2_3868_CGC16 | CGCFAM_06822 | Yes | 6 | 1 | |
| HRGMv2_3868_CGC27 | CGCFAM_07306 | Yes | 9 | 1 | |
| HRGMv2_3868_CGC24 | CGCFAM_09253 | Yes | 4 | 2 | |
| HRGMv2_3868_CGC13 | CGCFAM_09669 | Yes | 7 | 2 |
Top CAZyme Families