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Cluster: HRGMv2_3868_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_3868_8 HRGMv2_3868_8_2 793 1878 + GT9
STP HRGMv2_3868_8 HRGMv2_3868_8_3 1875 2894 + AAA
pfam HRGMv2_3868_8 HRGMv2_3868_8_4 2897 4522 - DUF4153
CAZyme HRGMv2_3868_8 HRGMv2_3868_8_5 4757 5923 + GH171
TC HRGMv2_3868_8 HRGMv2_3868_8_6 5951 7396 + 2.A.21.3.7
pfam HRGMv2_3868_8 HRGMv2_3868_8_7 7403 8290 + WYL
TC HRGMv2_3868_8 HRGMv2_3868_8_8 8429 11005 + 1.B.14.6.12
Gene ID: HRGMv2_3868_8_2
Type: CAZyme
Location: 793 - 1878 (+)
Gene ID: HRGMv2_3868_8_3
Type: STP
Location: 1875 - 2894 (+)
Gene ID: HRGMv2_3868_8_4
Type: pfam
Location: 2897 - 4522 (-)
Gene ID: HRGMv2_3868_8_5
Type: CAZyme
Location: 4757 - 5923 (+)
Gene ID: HRGMv2_3868_8_6
Type: TC
Location: 5951 - 7396 (+)
Gene ID: HRGMv2_3868_8_7
Type: pfam
Location: 7403 - 8290 (+)
Gene ID: HRGMv2_3868_8_8
Type: TC
Location: 8429 - 11005 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Muribaculaceae
→
Genus
Limisoma
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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