Cluster: HRGMv2_3868_CGC17
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3868
- CGC Family ID: CGCFAM_03541
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3868_15 | HRGMv2_3868_15_50 | 47471 | 49795 | - | 2.A.37.5.2 |
| TC | HRGMv2_3868_15 | HRGMv2_3868_15_51 | 49825 | 50565 | - | 9.B.20.1.4 |
| NULL(UNKNOWN) | HRGMv2_3868_15 | HRGMv2_3868_15_52 | 50815 | 51744 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_3868_15 | HRGMv2_3868_15_53 | 51820 | 53976 | - | GH97 |
Gene ID: HRGMv2_3868_15_50
Type: TC
Location: 47471 - 49795 (-)
Type: TC
Location: 47471 - 49795 (-)
Gene ID: HRGMv2_3868_15_51
Type: TC
Location: 49825 - 50565 (-)
Type: TC
Location: 49825 - 50565 (-)
Gene ID: HRGMv2_3868_15_52
Type:
Location: 50815 - 51744 (+)
Type:
Location: 50815 - 51744 (+)
Gene ID: HRGMv2_3868_15_53
Type: CAZyme
Location: 51820 - 53976 (-)
Type: CAZyme
Location: 51820 - 53976 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Muribaculaceae
Genus
Limisoma
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.