Genome Details
Selected Rep_genome_ID: HRGMv2_3863
Total Genomes Found: 1
Total Genomes Found: 1
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Prevotella
Species
Prevotella lacticifex
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| HRGMv2_3863 | 3,607,408 | 98.37% | 0.406% | South Korea | Asia | HRGM |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| HRGMv2_3863_CGC13 | CGCFAM_00007 | Yes | 8 | 5 | |
| HRGMv2_3863_CGC26 | CGCFAM_00017 | Yes | 8 | 1 | fructan |
| HRGMv2_3863_CGC39 | CGCFAM_00025 | Yes | 4 | 1 | pectin/alpha-glucan |
| HRGMv2_3863_CGC3 | CGCFAM_00034 | Yes | 5 | 4 | |
| HRGMv2_3863_CGC14 | CGCFAM_00081 | Yes | 14 | 1 | |
| HRGMv2_3863_CGC35 | CGCFAM_00082 | Yes | 3 | 1 | beta-mannan |
| HRGMv2_3863_CGC16 | CGCFAM_00146 | Yes | 6 | 2 | |
| HRGMv2_3863_CGC7 | CGCFAM_00181 | Yes | 6 | 2 | |
| HRGMv2_3863_CGC15 | CGCFAM_00197 | Yes | 7 | 1 | |
| HRGMv2_3863_CGC19 | CGCFAM_00630 | Yes | 4 | 1 | |
| HRGMv2_3863_CGC8 | CGCFAM_00839 | Yes | 5 | 1 | |
| HRGMv2_3863_CGC32 | CGCFAM_00925 | Yes | 6 | 2 | beta-glucan |
| HRGMv2_3863_CGC11 | CGCFAM_01553 | Yes | 4 | 1 | |
| HRGMv2_3863_CGC5 | CGCFAM_01729 | Yes | 7 | 2 | |
| HRGMv2_3863_CGC27 | CGCFAM_01798 | Yes | 9 | 2 | |
| HRGMv2_3863_CGC20 | CGCFAM_03741 | Yes | 3 | 1 | |
| HRGMv2_3863_CGC34 | CGCFAM_04006 | Yes | 3 | 1 |
Top CAZyme Families