dbCAN Logo

Cluster: HRGMv2_3863_CGC27

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_3863_58 HRGMv2_3863_58_2 2082 3041 - GT2
CAZyme HRGMv2_3863_58 HRGMv2_3863_58_3 3043 4008 - GT2
NULL(UNKNOWN) HRGMv2_3863_58 HRGMv2_3863_58_4 4338 4856 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_3863_58 HRGMv2_3863_58_5 4893 6833 - 1.B.14.4.3
TC HRGMv2_3863_58 HRGMv2_3863_58_6 7018 7677 - 5.A.3.1.2
pfam HRGMv2_3863_58 HRGMv2_3863_58_7 7689 8192 - Nitrate_red_del
TC HRGMv2_3863_58 HRGMv2_3863_58_8 8208 9719 - 5.A.3.1.1
TC HRGMv2_3863_58 HRGMv2_3863_58_9 9721 13413 - 5.A.3.1.1
TC HRGMv2_3863_58 HRGMv2_3863_58_10 13438 14727 - 2.A.1.8.15
Gene ID: HRGMv2_3863_58_2
Type: CAZyme
Location: 2082 - 3041 (-)
Gene ID: HRGMv2_3863_58_3
Type: CAZyme
Location: 3043 - 4008 (-)
Gene ID: HRGMv2_3863_58_4
Type:
Location: 4338 - 4856 (-)
Gene ID: HRGMv2_3863_58_5
Type: TC
Location: 4893 - 6833 (-)
Gene ID: HRGMv2_3863_58_6
Type: TC
Location: 7018 - 7677 (-)
Gene ID: HRGMv2_3863_58_7
Type: pfam
Location: 7689 - 8192 (-)
Gene ID: HRGMv2_3863_58_8
Type: TC
Location: 8208 - 9719 (-)
Gene ID: HRGMv2_3863_58_9
Type: TC
Location: 9721 - 13413 (-)
Gene ID: HRGMv2_3863_58_10
Type: TC
Location: 13438 - 14727 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List