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Cluster: HRGMv2_3863_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3863_14 HRGMv2_3863_14_8 8940 10049 - 9.B.146.1.4
pfam HRGMv2_3863_14 HRGMv2_3863_14_9 10197 11450 + UDPG_MGDP_dh | NAD_Gly3P_dh_N | 3HCDH_N | UDPG_MGDP_dh_C | UDPG_MGDP_dh_N
CAZyme HRGMv2_3863_14 HRGMv2_3863_14_10 11730 12647 - GT2
pfam HRGMv2_3863_14 HRGMv2_3863_14_11 12773 14179 + CotH
CAZyme HRGMv2_3863_14 HRGMv2_3863_14_12 14201 16276 - GH141
CAZyme HRGMv2_3863_14 HRGMv2_3863_14_13 16276 17040 - GT2
CAZyme HRGMv2_3863_14 HRGMv2_3863_14_14 17074 17919 - GT2
CAZyme HRGMv2_3863_14 HRGMv2_3863_14_15 17969 19090 - GT4
Gene ID: HRGMv2_3863_14_8
Type: TC
Location: 8940 - 10049 (-)
Gene ID: HRGMv2_3863_14_9
Type: pfam
Location: 10197 - 11450 (+)
Gene ID: HRGMv2_3863_14_10
Type: CAZyme
Location: 11730 - 12647 (-)
Gene ID: HRGMv2_3863_14_11
Type: pfam
Location: 12773 - 14179 (+)
Gene ID: HRGMv2_3863_14_12
Type: CAZyme
Location: 14201 - 16276 (-)
Gene ID: HRGMv2_3863_14_13
Type: CAZyme
Location: 16276 - 17040 (-)
Gene ID: HRGMv2_3863_14_14
Type: CAZyme
Location: 17074 - 17919 (-)
Gene ID: HRGMv2_3863_14_15
Type: CAZyme
Location: 17969 - 19090 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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