dbCAN Logo

Cluster: HRGMv2_3863_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_3863_5 HRGMv2_3863_5_20 19024 20409 + CE11
pfam HRGMv2_3863_5 HRGMv2_3863_5_21 20475 21245 + Acetyltransf_11
pfam HRGMv2_3863_5 HRGMv2_3863_5_22 21248 22159 + IPPT | IPT
CAZyme HRGMv2_3863_5 HRGMv2_3863_5_23 22166 24700 + GT51
pfam HRGMv2_3863_5 HRGMv2_3863_5_24 25594 27339 - PIF1 | AAA_19 | AAA_22 | AAA_30
pfam HRGMv2_3863_5 HRGMv2_3863_5_25 27346 28806 - PK | PK_C
TC HRGMv2_3863_5 HRGMv2_3863_5_26 29948 31288 - 9.B.168.1.2
Gene ID: HRGMv2_3863_5_20
Type: CAZyme
Location: 19024 - 20409 (+)
Gene ID: HRGMv2_3863_5_21
Type: pfam
Location: 20475 - 21245 (+)
Gene ID: HRGMv2_3863_5_22
Type: pfam
Location: 21248 - 22159 (+)
Gene ID: HRGMv2_3863_5_23
Type: CAZyme
Location: 22166 - 24700 (+)
Gene ID: HRGMv2_3863_5_24
Type: pfam
Location: 25594 - 27339 (-)
Gene ID: HRGMv2_3863_5_25
Type: pfam
Location: 27346 - 28806 (-)
Gene ID: HRGMv2_3863_5_26
Type: TC
Location: 29948 - 31288 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List