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Cluster: HRGMv2_3863_CGC26

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3863_46 HRGMv2_3863_46_10 11112 12290 - 2.A.1.7.17
NULL(UNKNOWN) HRGMv2_3863_46 HRGMv2_3863_46_11 12523 12711 + NULL(UNKNOWN)
[View Structural Homologs]
TF HRGMv2_3863_46 HRGMv2_3863_46_12 12919 15120 - HTH_AraC
CAZyme HRGMv2_3863_46 HRGMv2_3863_46_13 15669 17453 - GH32
pfam HRGMv2_3863_46 HRGMv2_3863_46_14 17486 19225 - SusD_RagB | SusD-like_3
TC HRGMv2_3863_46 HRGMv2_3863_46_15 19263 22382 - 1.B.14.6.1
pfam HRGMv2_3863_46 HRGMv2_3863_46_16 22666 23241 + HlyD_3
TC HRGMv2_3863_46 HRGMv2_3863_46_17 23243 23992 + 3.A.1.122.2
Gene ID: HRGMv2_3863_46_10
Type: TC
Location: 11112 - 12290 (-)
Gene ID: HRGMv2_3863_46_11
Type:
Location: 12523 - 12711 (+)
Gene ID: HRGMv2_3863_46_12
Type: TF
Location: 12919 - 15120 (-)
Gene ID: HRGMv2_3863_46_13
Type: CAZyme
Location: 15669 - 17453 (-)
Gene ID: HRGMv2_3863_46_14
Type: pfam
Location: 17486 - 19225 (-)
Gene ID: HRGMv2_3863_46_15
Type: TC
Location: 19263 - 22382 (-)
Gene ID: HRGMv2_3863_46_16
Type: pfam
Location: 22666 - 23241 (+)
Gene ID: HRGMv2_3863_46_17
Type: TC
Location: 23243 - 23992 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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