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Cluster: HRGMv2_3863_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3863_21 HRGMv2_3863_21_17 17671 18495 + 3.A.1.140.1
pfam HRGMv2_3863_21 HRGMv2_3863_21_18 18533 19858 + AA_kinase | ACT_9
pfam HRGMv2_3863_21 HRGMv2_3863_21_19 19915 21084 + Orn_DAP_Arg_deC | Orn_Arg_deC_N
CAZyme HRGMv2_3863_21 HRGMv2_3863_21_20 21084 22262 + GT2
pfam HRGMv2_3863_21 HRGMv2_3863_21_21 22268 23419 + Glyco_transf_4 | Glyco_trans_4_4
pfam HRGMv2_3863_21 HRGMv2_3863_21_22 23462 25453 + FBPase_2
TC HRGMv2_3863_21 HRGMv2_3863_21_23 25897 27426 - 1.B.9.4.2
Gene ID: HRGMv2_3863_21_17
Type: TC
Location: 17671 - 18495 (+)
Gene ID: HRGMv2_3863_21_18
Type: pfam
Location: 18533 - 19858 (+)
Gene ID: HRGMv2_3863_21_19
Type: pfam
Location: 19915 - 21084 (+)
Gene ID: HRGMv2_3863_21_20
Type: CAZyme
Location: 21084 - 22262 (+)
Gene ID: HRGMv2_3863_21_21
Type: pfam
Location: 22268 - 23419 (+)
Gene ID: HRGMv2_3863_21_22
Type: pfam
Location: 23462 - 25453 (+)
Gene ID: HRGMv2_3863_21_23
Type: TC
Location: 25897 - 27426 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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