Genome Details
Selected Rep_genome_ID: HRGMv2_3781
Total Genomes Found: 9
Total Genomes Found: 9
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Verrucomicrobiota
Class
Lentisphaeria
Order
Victivallales
Family
Victivallaceae
Genus
Victivallis
Species
Victivallis sp900550905
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| AG534_bin.73 | 4,036,331 | 93.92% | 2.36% | NA | Africa | H3AfricaPhase2 |
| CGMR034802 | 4,018,154 | 93.92% | 3.04% | China | Asia | CGMR |
| GCA_021625305.1_ASM2162530v1_genomic | 4,178,047 | 92.91% | 2.7% | NA | Africa | H3AfricaPhase1 |
| GCA_021629065.1_ASM2162906v1_genomic | 4,502,970 | 90.38% | 3.18% | NA | Africa | H3AfricaPhase1 |
| GCA_021630385.1_ASM2163038v1_genomic | 4,050,358 | 92.23% | 3.72% | NA | Africa | H3AfricaPhase1 |
| GCA_021639785.1_ASM2163978v1_genomic | 4,067,922 | 93.92% | 3.04% | NA | Africa | H3AfricaPhase1 |
| HRGMv2_3781 | 3,975,766 | 93.24% | 1.689% | UK | Europe | HRGM |
| MGYG000004513 | 4,294,613 | 92.57% | 2.4% | Israel | Asia | UHGG |
| REFINED_METABAT215_TOP10_CONTIGS_1500_ASSEMBLY_K77_MERGED__Nepal_MoBio_Fiber-Hadza-Nepal_F_1_RAJ0018YZ.221 | 3,913,982 | 93.24% | 2.36% | NA | Africa | Hadza |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| HRGMv2_3781_CGC13 | CGCFAM_00105 | Yes | 5 | 2 | |
| HRGMv2_3781_CGC39 | CGCFAM_01526 | Yes | 4 | 1 | |
| HRGMv2_3781_CGC49 | CGCFAM_01590 | Yes | 4 | 1 | |
| HRGMv2_3781_CGC36 | CGCFAM_02046 | Yes | 4 | 1 | |
| HRGMv2_3781_CGC59 | CGCFAM_02046 | Yes | 5 | 2 | |
| HRGMv2_3781_CGC60 | CGCFAM_03249 | Yes | 6 | 2 | |
| HRGMv2_3781_CGC53 | CGCFAM_03250 | Yes | 8 | 1 | |
| HRGMv2_3781_CGC28 | CGCFAM_03252 | Yes | 9 | 2 | |
| HRGMv2_3781_CGC18 | CGCFAM_03413 | Yes | 3 | 1 | |
| HRGMv2_3781_CGC11 | CGCFAM_04668 | Yes | 7 | 2 | |
| HRGMv2_3781_CGC32 | CGCFAM_04669 | Yes | 4 | 1 | |
| HRGMv2_3781_CGC34 | CGCFAM_04670 | Yes | 8 | 3 | |
| HRGMv2_3781_CGC15 | CGCFAM_06240 | Yes | 4 | 2 | |
| HRGMv2_3781_CGC16 | CGCFAM_06855 | Yes | 7 | 2 | |
| HRGMv2_3781_CGC10 | CGCFAM_07102 | Yes | 3 | 1 | |
| HRGMv2_3781_CGC61 | CGCFAM_07106 | Yes | 5 | 1 | |
| HRGMv2_3781_CGC6 | CGCFAM_07108 | Yes | 3 | 1 | |
| HRGMv2_3781_CGC45 | CGCFAM_07111 | Yes | 7 | 2 | |
| HRGMv2_3781_CGC3 | CGCFAM_07112 | Yes | 9 | 1 | |
| HRGMv2_3781_CGC8 | CGCFAM_09308 | Yes | 5 | 2 |
Top CAZyme Families