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Cluster: HRGMv2_3781_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3781_1 HRGMv2_3781_1_120 159961 162114 - 9.A.8.1.6
TF HRGMv2_3781_1 HRGMv2_3781_1_121 162181 162867 - Fe_dep_repress
STP HRGMv2_3781_1 HRGMv2_3781_1_122 163012 163815 + Peripla_BP_2
TC HRGMv2_3781_1 HRGMv2_3781_1_123 163806 164192 + 1.A.43.1.5
STP HRGMv2_3781_1 HRGMv2_3781_1_124 164208 165518 - AAA
TC HRGMv2_3781_1 HRGMv2_3781_1_125 165731 167092 + 2.A.27.2.2
NULL(UNKNOWN) HRGMv2_3781_1 HRGMv2_3781_1_126 167085 169064 + NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) HRGMv2_3781_1 HRGMv2_3781_1_127 169015 170817 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_3781_1 HRGMv2_3781_1_128 170860 173907 - GH38
Gene ID: HRGMv2_3781_1_120
Type: TC
Location: 159961 - 162114 (-)
Gene ID: HRGMv2_3781_1_121
Type: TF
Location: 162181 - 162867 (-)
Gene ID: HRGMv2_3781_1_122
Type: STP
Location: 163012 - 163815 (+)
Gene ID: HRGMv2_3781_1_123
Type: TC
Location: 163806 - 164192 (+)
Gene ID: HRGMv2_3781_1_124
Type: STP
Location: 164208 - 165518 (-)
Gene ID: HRGMv2_3781_1_125
Type: TC
Location: 165731 - 167092 (+)
Gene ID: HRGMv2_3781_1_126
Type:
Location: 167085 - 169064 (+)
Gene ID: HRGMv2_3781_1_127
Type:
Location: 169015 - 170817 (-)
Gene ID: HRGMv2_3781_1_128
Type: CAZyme
Location: 170860 - 173907 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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